Cant encrypt some folders that worked with old version

I finally removed all my previous encrypted folders from the older version of espionage and am now ready to go with the newer version. the older version has been successfully uninstalled and the newer version has been successfully installed and activated(lifetime) Now when i try to add the individual folders that had previously worked perfectly with the older espionage,i immediately get an error at the end of the copying script that says " Error during copy: "DocumentRevisions -V100" couldn't be moved because you don't have permission to access "Documents" could not copy all of Users/Justin/documents see system log for more.
I found the exact file it was talking about,it is an invisible file that the folder itself has a red minus symbol on it,as all of these kinds of hidden files generally do. I checked the permissions on the folder itself and it is a system file,that's why it is hidden. I can change the permissions but usually that causes huge weird problems if you screw with stuff like that. Again thats why it is a hidden file used by the system. What the heck is going on bc im sure the older version of espionage copied that file/s as well when making the secure sparseimage of that particular folder before with no errors like this until now. Should i attempt a repair permissions command in disk utility/onyx/cocktail?? Although that usually does nothing in these situations and it always finds the same permissions corrupt or bad and says it fixed them. Has been happening on mac os x for over 10 years now. Please reply with insight on this error ,i can understand very easily what to do or whats going on. I know a lot about macs and actually repair all systems for my friends. But crap like this i am have no clue. Thank you in advance. I hope this gets fixed or it will be useless to me if i cant encrypt my documents folder,which has all of my important everything!!!
update: i just successfully encrypted my entire iTunes folder as i did with the older espionage and it seems to be working as it should without that permissions error. maybe its just something specific to the documents folder,although there are a ton of those "-V100" folders on the system,i am sure i will run into this problem again while continuing to encrypt the rest of the folders i want to.
also how do you set the individual settings and passwords for each individual folder chosen?? i loved the way the old one had different settings for each. there is no way to set the encryption method with this 3.0 version,before i choose from 128-256 bt and could set whatever passwords i wanted to. Now it only lets you create a group of folders which sounded like the same thing except again no way to set the security level(128/256 bt) and it wont let me use my same password for all of them.
I found the exact file it was talking about,it is an invisible file that the folder itself has a red minus symbol on it,as all of these kinds of hidden files generally do. I checked the permissions on the folder itself and it is a system file,that's why it is hidden. I can change the permissions but usually that causes huge weird problems if you screw with stuff like that. Again thats why it is a hidden file used by the system. What the heck is going on bc im sure the older version of espionage copied that file/s as well when making the secure sparseimage of that particular folder before with no errors like this until now. Should i attempt a repair permissions command in disk utility/onyx/cocktail?? Although that usually does nothing in these situations and it always finds the same permissions corrupt or bad and says it fixed them. Has been happening on mac os x for over 10 years now. Please reply with insight on this error ,i can understand very easily what to do or whats going on. I know a lot about macs and actually repair all systems for my friends. But crap like this i am have no clue. Thank you in advance. I hope this gets fixed or it will be useless to me if i cant encrypt my documents folder,which has all of my important everything!!!
update: i just successfully encrypted my entire iTunes folder as i did with the older espionage and it seems to be working as it should without that permissions error. maybe its just something specific to the documents folder,although there are a ton of those "-V100" folders on the system,i am sure i will run into this problem again while continuing to encrypt the rest of the folders i want to.
also how do you set the individual settings and passwords for each individual folder chosen?? i loved the way the old one had different settings for each. there is no way to set the encryption method with this 3.0 version,before i choose from 128-256 bt and could set whatever passwords i wanted to. Now it only lets you create a group of folders which sounded like the same thing except again no way to set the security level(128/256 bt) and it wont let me use my same password for all of them.